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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Draft genome sequences of two bacterial type strains isolated from a methanogenic bioreactor: Ruminiclostridium sufflavum DSM 19573T and Anaerosphaera aminiphila DSM 21120T
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. globulus . … list of putative genes from C. citriodora to known TPS gene sequences from Eucalyptus species and other plants. The …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 … Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To … approach: CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … the HGP, the JGI has sustained its commitment to uploading sequence data generated on behalf of its user community to … first. For nearly 40 years, the International Nucleotide Sequence Database Collaboration (INSDC) has managed the …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   … as well as degradation products that accumulated as the fungus did its work.  The UC Santa Barbara team worked with … The authors acknowledge their funding sources: Office of Biological and …
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Draft genome sequences of strains CBS6241 and CBS6242 of the basidiomycetous yeast Filobasidium floriforme
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Draft Genome Sequences of the Black Truffles Tuber brumale Vittad. and Tuber indicum Cook & Massee
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Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity
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RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
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