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Training the Next Generation of Talent
… DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … on the genetic mechanisms of chemotaxis in the Arabidopsis microbiome, particularly, how bacteria can be driven toward … were directly assigned to the two of us just to get the structure set up and collect the first round of feedback …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … far-flung species would speed up efforts to harness species diversity in traits relevant to U.S. Department of Energy …
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Calculating the Costs of Multiple Switchgrass Gene Copies
… A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … by our research team surveying the genomic and phenotypic diversity across the natural range of switchgrass found that … to harbor less genetic and phenotypic (visible traits) diversity. After our team finished analyzing the diversity …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … evolution and rapid changes in both genome content and structure following a genome duplication event that occured … showed that genes directing development of reproductive structures in seed plants were essentially co-opted from …
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Viruses Reprogram Cells into Different Virocells
… from The Ohio State University and the University of Michigan studying how virus infections cause significant … is known about the impacts of these infections on ecosystem functions. As part of efforts to characterize global microbial diversity with an aim to improve predictive ecosystems …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … regional and global biogeography of haloarchaea and the structure and extent of the Antarctic microbial pan-genome. … are available through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) platform. These data allowed researchers …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … enzymes discovered in extreme environments to engineered microbiomes that accelerate biomass processing. This year’s … efforts including systems-based approaches to unravel functional capabilities of plants, microbes and microbial …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and … — so researchers can easily explore the evolutionary and functional relationships among the different algae. …
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