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Bioenergy sorghum stem density increases threefold following internode elongation due to continued accumulation of lignified cell walls and complex regulation of genes involved in cell wall biosynthesis
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … P. Sloan Foundation Grant 2013-10-27 (to the University of California, Berkeley [N.V.]); L’Ecole Normale …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single … just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … support, how much help can users expect for data analysis of the different omics analysis? Are users expected …
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First Monoploid Reference Sequence of Sugarcane
… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … The reference sequence is useful for mapping the genes involved in sugar production and for identifying …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find novel functions …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI … and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship with the JGI …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal … archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the … This is the first episode of Natural Prodcast, a podcast produced by the US Department …
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … Settlement Biomedical Research Enhancement Funds as part of a startup grant of the University of Nebraska Lincoln, the Research & Artistry Award of Northern Illinois …
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