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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their potential … ability of these enzymes to break down these recalcitrant carbohydrates into more versatile molecules that can be then …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and … eventually, their findings could help us grow better crops, with less impact on our planet. …
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Cracking the Secrets of the Diatom’s Shell
… Diatoms, a group of tiny algae, are also known as “living opals” because of the … beautiful properties of their silica shells. But what genes are responsible for such mesmerizing exteriors? …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network of field research sites … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( … traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine … understanding which microbes are present in a sample, to generate data about which organisms are active, and which …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … their hosts. For example, microbes that capture and store carbon in the ocean could fix less carbon when infected. … outcomes of these infections can affect the interactions within their ecosystems. Summary Microbes drive the energy …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing … seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they … stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to the …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … grass that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it can … 2007, the JGI has been working on identifying switchgrass genes related to biomass production, drought tolerance, and …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics … and recaps of all three keynote talks follow, starting with Bruce Hungate. Other videos of talks from the JGI … can make phenazines, and which microbes are most capable of generating phenazine production.” This led to them …
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JGI Announces 2023 Community Science Program Awardees
… Congratulations to the proposers of the 19 proposals selected for … (Berkeley Lab). “We’re very excited to start working with this years’ crop of CSP recipients, over half of which … This year’s annual CSP call had five areas of emphasis: genes to function, plant and algal functional genomics, …
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