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2022 Progress Report
… the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the … Science user facility at Lawrence Berkeley National Laboratory (Berkeley Lab), is to become the leading integrative …
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Better Genome Editing for Bioenergy
… team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The … Department of Energy’s goal of producing sustainable fuels from alternative sources. Moreover, the team says the … Foundation Graduate Research Fellowship Program ( DGE-1110007 ). SA, AB, and MB were supported by NSF  1706134 . SL …
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A sweet spot in marine ecosystems
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JGI@25: Strengthening Soybean
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis of the French National Institute … to sequence — roughly 1.25 billion Gb (gigabasepairs — most fungi are around 50 million Mb, or megabases, in size). So, …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be … genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome …
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Integrating Experimentation with Data
… (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating Experimentation with … flash talks, and instructive workshops. Researchers from academia, government, and industry, are invited. Check …
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Alpha‐ and beta‐mannan utilization by marine Bacteroidetes
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Protist impacts on marine cyanovirocell metabolism
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I-Min (Amy) Chen
… one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for scientific … of Application Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible for the development of key … Reddy TBK, Chen I-MA et al. IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and …
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Scaling Up Existing Skill Sets
… bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect … The technology expresses the transcription factor proteins from a DNA template amplified directly from either genomic … what TFs and regulatory networks are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five …
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Nick Everson
Resources, Facilities, IT, Shipping and Receiving, Lab Automation, and Administration departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics … 2015 Served on the Council of UC Staff Assemblies (CUCSA) from 2015 to 2018, representing Berkeley Lab in this UC-wide …
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