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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … We focus our efforts on integrating database mining and sequence design with scaling the production of large, … We also develop methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and …
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A phylogenetically novel cyanobacterium most closely related to Gloeobacter
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning …
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Offerings & Capabilities
… of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: Sequencing, … through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … at Lawrence Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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Taking Stock of the Known and Unknown Microbial Space
… genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their study assesses … of the urgency to cultivate new microbial species.” Targeted Explorations for Understanding the Microbial World …
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The Fungi That Survive In Antarctica
Black fungi are microscopic and mighty. They survive everywhere … of Tuscia researchers Laura Selbmann and Claudia Coleine are working with scientists from around the world – and the JGI – to …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … (Berkeley Lab), to fill in these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …
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Development and Assessment of SNP Genotyping Arrays for Citrus and Its Close Relatives
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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