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Institutional User Agreements
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Model Fern Reveals Insight into DNA Thievery in Ferns
… history of a pivotal plant as well as the evolution of seed plants, the fern’s distant cousin. Ceratopteris … power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing … But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond models,” he said. Cole annotated cell types in the plant root atlas, and noted that the approach he developed …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy …
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Programs & Platform Leads
… drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … also known as “polyploidy,” is common among flowering plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many genes after …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … applied  R. irregularis spores directly to  M. truncatula seedlings grown in a controlled environment chamber, so the … colonize the plants’ roots. Then, comparing with control seedlings which were not treated with fungi, they used …
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Partnerships: Adopt-A-Genome
… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …
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Isolation, Characterization, and Pathogenicity of Two Pseudomonas syringae Pathovars from Populus trichocarpa Seeds
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Better Crops With a Pointillist Approach to Plant Genomics
In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And …
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