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… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … and professional expertise to support the global research community in studies of complex biological and environmental … knowledge to understand, predict, and design biological functions that can address complex challenges in resource …

… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … data.   FY05-07 Sequencing Goals and Results Fiscal Year Sequence (GB) Operating Hours Targets Actual* Targets Actual …

… validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct … contributions, is key to understanding their ecosystem functions in processes ranging from nutrient cycling to …

… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their …

… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …

… Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the … Prospective users with questions on how to partner with the Metagenome Science Program on their research are encouraged …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … way to connect genes and infer changes in gene function across the phylogeny — and link these into our DOE …

… chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The Science … di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a …

… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from … 15.  Q: What is the user annotation process (are these functional annotations) and how are these integrated within …

… to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for …