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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Publication Policy
… to a research project are appropriately recognized and credited for their work, while also adhering to the … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of …
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User Advisory Committees
… which guide the relationships we nurture in our workplace and seek to establish with our stakeholders. The guiding … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users … (JAC) is convened by the JGI Director to provide guidance on the Institute’s strategic, scientific, technical, …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which were isolated from diverse freshwater environments. Arising in …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , … framework provided by these high quality reference genome sequences could help researchers better understand related … This project received funding from the European Research Council under the European Union’s Horizon 2020 …
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Genome-Based Taxonomic Classification of the Phylum Actinobacteria
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Micro-Scale Applications Group
… microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical standards to accurately measure environmental …
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Examples: Successful LOIs & Submissions
… to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science … calls. These documents have been shared with permission from the PIs who drafted them.  … lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … these initial efforts: Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials proposal call . This represents a unique … opportunity for researchers to request the capabilities and expertise of both national user facilities in one …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to …
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