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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( Actinomycetota ), a group of bacteria with … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … is a strong chemical and salinity gradient — and green sulfur bacteria,  Chlorobium , blooms. The specific mixture …
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Diversity and evolution of nitric oxide reduction in bacteria and archaea.
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Streamlining Regulon Identification in Bacteria
… particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … regulation is critical to ensuring genes vital for growth and survival across various environments are … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. …
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Synthetic Biology Lab
… technologies to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the production of large, … developing methods for converting digital information from sequence databases into biotechnological or environmental …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or …
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Comparative Genomic Insights into Ecophysiology of Neutrophilic, Microaerophilic Iron Oxidizing Bacteria
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal … don’t already have an account) and click the “Begin” button for the call you are interested in. All proposals must be …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate … For further details, please reach out to the Group Lead …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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Year in Review: JGI’s 2018 Progress Report Available Now
… is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and … mobility and to better understand their roles in the global sulfur cycle. Copies are available online – click here to go …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… flagella in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that flagella were lost in other forms of  Chloroflexota that adapted to marine environments … of millions of years ago.  The Impact Chloroflexota are bacteria that act like tiny natural engineers with special …
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