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Synthetic Biology Lab
… technologies to the broader community.  We focus our efforts on integrating database mining and sequence design … ever-higher levels of throughput. We also develop methods for efficient QA/QC based on next-generation sequencing … for inferring genotype to phenotype associations. Research Team    … For further details, please reach out to …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent … process these little makers rely on to survive. Now, new research enabled by the U.S. Department of Energy (DOE) … their research of these newly found methanogens  in diverse ecosystems with  support from a DOE Established Program to …
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Adaptation strategies of giant viruses to low-temperature marine ecosystems
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Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems
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Training the Next Generation of Talent
UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy Joint Genome … Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate … getting a picture of the amount of data that’s going to be generated at academic level in a few years as it’s getting …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … a terabase — of soil RNA for this project, and produced the reference genomes that allowed for mapping these RNA reads. …
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JGI Advisory Committees Code of Conduct
… support our continuing contributions to advancing the research ecosystem. Their trust hinges on sustaining our record of excellence and respect, and for principles of integrity, safety and reliability. As …
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A Community Resource for Secondary Metabolite Researchers
… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … in the recent Database issue of the journal Nucleic Acids Research , the Secondary Metabolism Collaboratory (SMC) has … metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more … Institute for Biotechnology that worked on an updated reference genome for Theobroma cacao, the tree that produces …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …
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At the Forefront of Terrestrial Virus Research
… at JGI through a program that provides graduate thesis research opportunities at DOE laboratories.   …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… diversity. The article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and … Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …
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