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… instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the October … which identified new genomes highlighting the diversity of white rot fungi in the genus Lentinula. Dan Rokhsar looked … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …

Sure. Definitely. So, I got my PhD with Paul Hergenrother at the University of Illinois at Urbana-Champaign. … students, we obviously can't put any antibiotics or antifungals in there. So they get just a smattering. JACKIE: … based on what component they might be interested in like genomics, metabolomics, just basic chemistry, natural …

… countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …

The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens … science depicted. The two-story JGI mural was commissioned for the JGI’s 25th anniversary and done by Berkeley-based …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … Science  356: 82-85 Ovchinnikov S. et al. (2017) Protein structure determination using metagenome sequence …

In honor of the JGI's 25th anniversary in 2022, we have … challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal …

Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … used in the biotechnology industry to produce enzymes, proteins, and other chemicals. Summary Filamentous fungi are … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …

… is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data … the applicant/community, and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics …

Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User … transformations.” The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie …