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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE …
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Natural Prodcast Episode 4: Nancy Keller
… so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You … collaborate, let us know! Find out more at jgi.doe.gov/user-programs .   Thanks, and see you next time!  … Episode …
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Genomes OnLine Database (GOLD) v.8: overview and updates
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been …
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Natural Prodcast Episode 20: Brian Bachmann
… which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … we also worked in DIANs. We worked on that. We had separate projects with John Thorson and Ben Shen. [Listen here to Ben … colors. I mean, where else in nature– and they’re not fungal. Where else nature can you go see colonies of …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain sequences of DNA, … students, we obviously can't put any antibiotics or antifungals in there. So they get just a smattering. JACKIE: …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… of Energy Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National Lab. You … in partnering with us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, … collaborate, let us know. Find out more at jgi.doe.gov/user-programs . Thanks and see you next time. … Episode …
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Fungal Friends or Foes in Plant Roots
… other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture …
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Partners
… the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. … Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and … expand data functionality. Close partnerships with other user facilities enable the ability to leverage their …
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Natural Prodcast Episode 1: The Primer, Part 1
Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence Berkeley National … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, … let us know! Find out more at archive.jgi.doe.gov/user-programs . Thanks, and see you next time!  … Episode …
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