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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … using techniques that the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative …
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Gallionellaceae in rice root plaque: metabolic roles in iron oxidation, nutrient cycling, and plant interactions.
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … based on their DOE relevance.  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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Multicellular magnetotactic bacteria are genetically heterogeneous consortia with metabolically differentiated cells
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, … into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 …
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Diversity and evolution of nitric oxide reduction in bacteria and archaea.
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. … from The Ohio State University and the University of Michigan studying how virus infections cause significant … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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Partnerships: Adopt-A-Genome
… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose of the program is to: Build curiosity and illustrate the …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … to grow. If you hear Nigel talk, he is very interested in sequencing a lot more natural product-heavy culture … software as we need to go. JACLYN WINTER: You’re going to single-handedly cause like massive brownouts in California …
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