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… crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now analyze new datasets by comparing … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … with 8 billion metagenome genes from IMG (the study also references data from the JGI’s  Genomes from Earth’s …

Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … a subset of molecules that will fly on an analytical instrument and be detected. Dan Udwary: You’re making me so …

Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … environment – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic …

… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready for the public to tear it up. I’m super excited about this …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …

… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We … a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all …

… organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … a Lewis-and-Clark-like expedition to explore, collect and catalog samples, and look for patterns in algal communities, including the algae-associated microbiomes that influence algal diversity and gene …

Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became … National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data … . 39(5):578-585. Nayfach S, et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnol . …

The Facilities Integrating Collaborations for User Science (FICUS) call …   Biological Small-Angle Neutron Scattering (Bio-SANS) instrument available at Oak Ridge National Laboratory  Center …

… collaborate with users to develop project requirements, define the scope of work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the JGI is initiated via the Work Initiation …