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… diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and … at Lawrence Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet … this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is critical for plants in the …

… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow … cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She also develops novel flow cytometry …

… approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … was then used to produce a paired amplicon dataset (a.k.a. 16S rRNA gene sequencing), a shotgun metagenome, and a single …

… Input & sequencing Q(uestion): How much DNA is needed for “regular” vs the ultra-low input library creation … “regular” PacBio, since the low-input protocol involves PCR amplification of the library. 6mA and 4mC (~50x depth), … Does JGI offer long-read metatranscriptome? (for e.g. full 16S, RNA virus, etc) A:  Long-read metatranscriptome / RNA …

… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There … that integrate genomics with nanoscale science in the area of critical minerals and materials. Details Proposals …

… mission priorities. Data discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for … researchers. Book a session via the appointment calendar for technical help, feedback or a guided walk-through of the …

… metagenomics and metatranscriptomics provide invaluable information on virus diversity and activity in microbial … resources. The main focus of these resource development efforts currently include:  in silico host prediction for uncultivated phages improved annotation and functional …