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JGI@25: Using Team Science to Build Communities Around Data
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … has a genome approximately three times the size of the human genome. There are four more fern genomes in progress. …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … you can still make more of it, then you start going into human trials or animal trials first, and going through all … probably been since the last decade. We have a lot more data. Obviously, there’s been a lot of sequencing going on, …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute … , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the … help tree breeders execute more targeted efforts to produce specific lines with desired traits. …
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Plant Program
… user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in … for sustainable solutions to current problems facing humanity. A major focus are biofuel feedstock species and … the Plant Program is advancing research into plant-microbiome interactions, focusing on how environmental …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews … the catalytic cycle. So that co-factor stays in the active site. And then the other part of that, the monooxygenases, … so starting from some of the enzymes that we had the most data on and knew the most about, working with my …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … be specific to species or groups of species.  The genome data also revealed that green millet was introduced into the … Danforth Center’s mission is to feed the hungry and improve human health. So there’s a major question: how to turn a C3 …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. … We're trying to. JACKIE: So I was reading on your website that-- speaking of hormones, that you're also using … them are actinobacteria. And so we get a lot of them from databases of organisms, so things like the NRL database - or …
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A framework for human microbiome research
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An Automated Tool for Assessing Virus Data Quality
… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … have now developed CheckV (pronounced “Check-Vee”) to help researchers assess and improve the quality of … scientist Stephen Nayfach, the study’s first author in the Microbiome Data Science group led by Nikos Kyrpides. To …
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Genome to gut: crop engineering for human microbiomes
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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