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JGI@25: Using Team Science to Build Communities Around Data
… 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … launched as an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Katherine Louie
Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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The initial soil microbiota impacts the potential for lignocellulose degradation during soil solarization
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Natural Prodcast Episode 6: Marc Chevrette
… to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … also, I thought you were a good representative of maybe a different career trajectory than we sometimes see… MARC: … Currie’s metagenomics research, enabled in part by JGI’s Community Science Program.] So that’s one example where we …
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Viruses Reprogram Cells into Different Virocells
… be a duck. But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a … from The Ohio State University and the University of Michigan studying how virus infections cause significant … into virocells that are metabolically and functionally different from uninfected cells. Duhaime and Sullivan are …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… … DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This … and Molecular Pharmacology there. We talked about several different pieces of her work, including bacterial quorum … an area that's really a huge area of unmet need within our community and thinking about how best to tackle these …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and biogeochemistry. In complement to the Community Science Program, JGI researchers drive innovations …
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Succession of physiological stages hallmarks the transcriptomic response of the fungus Aspergillus niger to lignocellulose
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with … the way nutrients flow through the ecosystem of Ace Lake is different than nearby Antarctic lakes of similar origin. The … (Berkeley Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, Ace …
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Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle
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