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Industry Engagement Program
… Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions — with capabilities that had remained largely … and assembled physical DNA constructs that can then be functionally characterized.  Our metabolomics platform …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… lake-effect snow from Great Salt Lake too. So that moves across, and I’m looking at my window because if it starts … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea … volcanoes,  researchers studied microbial communities across five oceanic regions. In doing so, they found a high … vent communities, with possible applications in biogeochemical engineering,  biofuel production and more. …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and uncultured in … to experimental characterization and validation of the functional potential of these new lineages. …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … a community-science program to collect samples from across the country to standardize the process. They noted …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and … of 2016 and all of 2017 looking for  C. californicus across the California-Baja coast and spots where they are …
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Mapping the Earth’s Hidden Fungal Kingdom
… into an estimated 2–6 million species — dwarfing the diversity of plants. To put this evolutionary timescale in … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … With roughly half of all fungal genes still lacking functional annotations, the challenge to applying AI is …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … a “river of grass” that stretches some 580,000 square miles across southern Florida, they encompass a wide range of … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … ever assembled. The team identified 15 core genes shared across all fungi, and found that some of these genes have … as reliable markers for classifying species and studying diversity in complex biological systems. By making the tools …
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Complete Genome Sequences of Two Phylogenetically Distinct Nitrospina Strains Isolated from the Atlantic and Pacific Oceans
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Major changes in microbial diversity and community composition across gut sections of a juvenile Panchlora cockroach
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this identification, metabolomics enables functional genome annotation, improves understanding of the … Find more details on the instrumentation we use and our …
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