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User Executive Committee Charter
Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI … users and their science including technical capabilities offered, proposal review procedures, and the annual user … consecutive terms. A Chair and Vice-Chair will be selected by the UEC members for one-year terms, after which the …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on …
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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based … merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of the …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … The disease is known more commonly as Sudden Oak Death or by its acronym, SOD. Of the dozens of Phytophthora species, … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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High-quality draft genome sequence of Gracilimonas tropica CL-CB462T (DSM 19535T), isolated from a Synechococcus culture
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Natural Prodcast Episode 17: Cassandra Quave
… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … in stores and online, and there’s an audio version, read by Cassandra, and the paperback version will be available in … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth
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The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. … in depth. So some of these that were initially identified by Russell Cox, like [INAUDIBLE]– DAN UDWARY: Explain to my … and there is a lot of literature around enzymes from thermophilic organisms where their peak activity is at an …
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The Expanding Universe of Methane Metabolisms in Archaea
… of the Institut Pasteur in France, the importance of methanogenesis and the presence of methanogens in nearly all … Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint Genome … set of genes present in archaea with metabolisms involving methyl-coenzyme M reductase (MCR), the final step in …
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Biochemistry‐Guided Prediction of the Absolute Configuration of Fungal Reduced Polyketides
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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