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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. …
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Genomic adaptations of the halophilic Dead Sea filamentous fungus Eurotium rubrum
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Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean
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Data Ecosystem
To expand access to integrated data, improve tools and … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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Complete genome sequence of Thermovibrio ammonificans HB-1T, a thermophilic, chemolithoautotrophic bacterium isolated from a deep-sea hydrothermal vent
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of … sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … to break down these recalcitrant carbohydrates into more versatile molecules that can be then utilized to generate …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute … biology tools that can help produce value-added products from these systems. He’s worked with the JGI on various CSP …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into … gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … provided by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) …
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