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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … openness, candor, transparency, and creativity framed by a positive, constructive and professional mindset, so …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … shallow portions of the groundwater were nearly cleared of contamination. By 2020, the water was at contamination …
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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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CSP Functional Genomics
Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … synthesis and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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A Step Toward Controlling Soybean Rust
… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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Controlling selectivity of modular microbial biosynthesis of butyryl-CoA-derived designer esters
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
…   Scanning the California oak woodlands from the air, large swaths of the bleached, skeletal remains of trees can … destroyer” and it has served as just that on a catastrophic scale from Baja California north into Oregon and beyond. The … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … crop enhancement. The program aims to tap into the largely unexplored biochemical diversity within secondary … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …
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Complete Genome Sequence of Agrobacterium sp. Strain 33MFTa1.1, Isolated from Thlaspi arvense Roots
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they … squares are depictions of what are called domains within a larger protein. And so each of those domains is sort of like …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a … and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … and single cell genomics have afforded JGI users and the larger research community a means to access microbial …
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