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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … Linking lignin engineering to drought stress resilience: RNA-seq and … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … in the samples that corresponded to eight separate groups of viruses. To visualize one particular viral genome …
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Strain Engineering
… The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae … The developed strains represent an additional phase of user-accessible project types, in which DNA-based …
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User Support
… the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled … https://signon.jgi.doe.gov ). Once users are notified that their proposal has been accepted, the PMO will assist with … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Tunturi virus isolates and metagenome-assembled viral genomes provide insights into the virome of Acidobacteriota in Arctic tundra soils
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … uncover these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … And many JGIers work to connect those big goals with their everyday activities, striving for sustainability in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … microbes evolve, they evolve to make molecules that improve their survival. Those molecules, over evolutionary time, … then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with everything that’s …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … was to reduce fuel in the forest and diminish the threat of intense wildfires. Moisture is also a factor in transmission …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … design of new experimental approaches to link viruses to their host(s), collaboration with JGI users for analyzing … B.S. in Microbiology, Université Blaise Pascal, France M.S. in …
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A call for caution in the biological interpretation of viral auxiliary metabolic genes
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