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Natural Prodcast Episode 22: Alison Narayan
… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … in synthetic chemistry as were you and then made their way into the field of natural products in some way, shape, or … help of JGI’s DNA synthesis grant. And that having a whole panel of these enzymes allows us to ask the questions which …
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Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
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How Microbes Can Protect Plants in Drier Straits
… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently …
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Comparative transcriptomics provides insights into molecular mechanisms of zinc tolerance in the ectomycorrhizal fungus Suillus luteus
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Community Science Program
… Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI capabilities, … call is for projects that translate genomic information into biological function. The  New Investigator and …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … that some of these genes have moved from the mitochondria into the nuclear genome over evolutionary time. They also … level. Because the annotations are standardized and span the full kingdom, they are well-suited to train machine …
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley … Genomics Resource” 2021-  Co-Chair, “Advances in Genome Biology & Technology- Agriculture” 2021-  Weill …
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Soil virus offers insight into maintaining microorganisms
… data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … chitosanases originated in bacteria before being modified into virus-specific versions through genetic drift and … X-rays.  This study only begins to unearth the insights to be found within soil viruses and AMGs. It could …
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Genomic variation within the maize stiff‐stalk heterotic germplasm pool
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Comparative Transcriptomics between Synechococcus PCC 7942 and Synechocystis PCC 6803 Provide Insights into Mechanisms of Stress Acclimation
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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