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Improved genome annotation for Zymomonas mobilis
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … our little section on international genome miners, and today we have Francisco Barona-Goméz, or Paco, as he prefers … figure out that there are metabolites that will rely their activity in the physical, chemical features of the compound. …
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Contribution of calcium ligands in substrate binding and product release in the Acetovibrio thermocellus glycoside hydrolase family 9 cellulase CelR
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… efficiency for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's chemical factories. They hold genetic … multiple chemical production pathways. By tracking gene activity and chemical output over time, the team mapped how …
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Glycosyl Cations versus Allylic Cations in Spontaneous and Enzymatic Hydrolysis
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The … This is of interest for bioenergy researchers looking to improve the industrial production of sustainable biofuels … (ENCODE) project, which is aimed at determining the activity, expression and regulation of protein-coding genes. …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files …
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Meeting Code of Conduct
… All participants and staff of JGI events are required to adhere to the following Code of Conduct. Event organizers will … throughout the entire event. All participants are expected to be familiar with this policy. Our aim in hosting an event …
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Webinars on Offerings & Capabilities
… here . You can find additional webinars covering how to use our data portals here.  …
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User Programs
… Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and … CLOSED ONGOING ONGOING CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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