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Natural Prodcast Episode 5: Brad Moore
… the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … discoveries being made, and then connecting that to biology was pretty darn exciting. So that was this era of …
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Frequently Asked Questions: Project Management
… Phycocosm (citation: https://doi.org/10.1093/nar/gkaa898 ) Plants: Phytozome (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … work done by the JGI. More information is available in our Publications Policy on our Data Policy & Support page.  …
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Secondary Metabolites Program
… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … metabolites produced by bacteria, fungi, algae and plants. These compounds are key to organisms' interactions … The Secondary Metabolites Program offers users extensive genomics, biodesign and metabolomics capabilities to …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond models,” he said. Cole annotated cell … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers … will help support targeted genetic breeding of eucalypts as woody biomass crops for the bioeconomy. The work contributes … with GENESPACE, a computational tool for comparative genomics.   With a more robust reference genome, researchers …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… the air, large swaths of the bleached, skeletal remains of trees can be seen. These plagued patches have become … ra-MOR-um) the genus in Latin translates to “plant destroyer” and it has served as just that on a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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User Support
… access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 19: Bill Fenical
… the catalyst of that. We also talk about his move to microbiology, about drug discovery and why it’s so hard to … local marine environment. I went out and picked up marine plants, I picked up animals. And I asked the simple question, are these plants and animals making chemical compounds in a way that’s …
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User Advisory Committees
… The Plant Program Advisory Committee is chartered to offer … Plant Program User Advisory Committee …
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Brachypodium: A monocot grass model system for plant biology
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BOTany methods: accessible automation for plant synthetic biology
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