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We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … every environment you can think about.   DAN: What kind of genomic resources are available these days for the natural …

… … DAN: You’re listening to the US. .Department of Energy Joint Genome … by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a …

… pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …

Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global …

RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro …