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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If “BERSS” is … at least 22 samples are required. If your proposed request falls below these thresholds, you will need to utilize a … performs sequencing, metabolomics and synthesis on behalf of the U.S. Department of Energy Bioenergy Research …
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User Programs
… accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support … and novel automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … also thrive in areas that receive a lot of rain.  Previous analysis of the E. grandis reference genome, an … eucalypt genomes to establish the feasibility of genome wide association studies for genetic traits that are …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … access to diverse datasets that deepen our understanding of how organisms interact with each other and with their …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … This the second episode of Natural Prodcast, which continues a conversation from the …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … the tools and data available through MycoCosm — a platform widely used across the research community — the work lowers … evolutionary processes. The team then extended their analysis beyond the reference set, using two additional …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … possible to do something that the field refers to as “genome mining”. So, if you can sequence the DNA and actually … This the third episode of Natural Prodcast, and the third and final part of our …
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Pests, diseases, and aridity have shaped the genome of Corymbia citriodora
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, … and the crop’s annual economic impact of $500 billion worldwide underscores its value and importance in the fabric of … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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