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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of … technology in order to enhance the quality of single-cell genomes and directly link functional information with …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their … food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal …
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Scaling Up Existing Skill Sets
… of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for … was an opportunity to adapt my existing skill set to a new scale, which presented a host of interesting and ultimately … receive to aspiring undergraduate researchers and help expand or develop more internship programs like the JGI …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… up heavily of sphagnum mosses.  New research identifies sex chromosomes in the plant and illuminates the significant … and hollows flow like hills and valleys, on a smaller scale. Depending on the species, some sphagnum may prefer … HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, …
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Chromosome assembled and annotated genome sequence of Aspergillus flavus NRRL 3357
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Pan genome of the phytoplankton Emiliania underpins its global distribution
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of … Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop … heavy metal contamination, and drought. The moss genomes’ metabolic pathways could lead to the discovery of … comprise a full third of each moss genome, and are almost four times the size of the next largest chromosome. As the …
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Dan Rokhsar
… the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the human genome … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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