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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … toxic molecules, and that human beings know, today, for small molecules. So they’re in the picomolar range. ALISON: … This is our conversation with Professor Ben Shen, from The Scripps Research Institute (TSRI) …
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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for more details, including a … The majority of JGI projects come from the user community. Find out about …
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … grow. Nitrogen is usually one of the, you know, important environmental [resources] that plants need to grow. And so, … This the second episode of Natural Prodcast, which continues a conversation from the …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … Or we focus on really particular metabolites from either an environmental point of view, in terms of algal blooms and … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Methane Cycling Microbial Community Characteristics: Comparing Natural, Actively Extracted, Restored and Unrestored Boreal Peatlands
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … their natural environment, we’re not subjecting them to the environmental triggers that they might need to turn a … This the third episode of Natural Prodcast, and the third and final part of our …
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Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes
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Discovery and annotation of small proteins using genomics, proteomics, and computational approaches
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … to enable great science that will help solve energy and environmental challenges.   Scanning the California oak … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense of what …
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