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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological …
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Protocols
… Find protocols provided by JGI and the JGI user community …
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Phylogenomics reveals convergent evolution of red-violet coloration in land plants and the origins of the anthocyanin biosynthetic pathway
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
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Variation and Inheritance of Small RNAs in Maize Inbreds and F1 Hybrids  
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Mining metatranscriptomes reveals a vast world of viroid-like circular RNAs
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and …
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The deuterostome context of chordate origins
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … moved from the mitochondria into the nuclear genome over evolutionary time. They also discovered more than 6,000 …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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The ectomycorrhizal fungus Pisolithus microcarpus encodes a microRNA involved in cross-kingdom gene silencing during symbiosis
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