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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro …
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Plant Program
… for key plant species, enhancing our understanding of plant diversity and integrating various data types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea
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Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria
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CalTeach
CalTeach is a program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their coursework focuses on STEM pedagogy, educational theory and promoting diversity, equity, and inclusion, with concurrent …
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … issue of Nature, the study highlights the vast functional diversity of microbes by looking at protein function within … rot fungi in the genus Lentinula. Dan Rokhsar looked to the evolutionary history of strawberries as part of a study to …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, … fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based …
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Propagation of viral genomes by replicating ammonia-oxidising archaea during soil nitrification
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … about several different pieces of her work, including bacterial quorum sensing and its effects on regulation of …
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