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iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Ancient  Chloroflexota s ditched their flagella and other traits when … and pH levels vary wildly from spring to spring. These biodiversity hotspots harbor specialized microbial communities … don’t have flagella, meaning they were lost in the evolutionary adaptation to marine environments. These …
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2025 NeLLi Symposium
…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis.  … define, quantify, and functionally characterize microbial diversity. The Symposium will also focus on experimental …
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CalTeach
… CalTeach is a program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their coursework focuses on STEM pedagogy, educational theory and promoting diversity, equity, and inclusion, with concurrent …   Internship Snapshots   …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro …
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Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea
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CSP Large Scale Call
… projects that address biological functions for biomanufacturing, critical minerals and materials, inter-organismal … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … emphasis that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All …
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Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Initially, my group really focused on marine actinobacteria. Then we moved into marine proteobacteria. Not a … This is episode 5 of Natural Prodcast, our conversation with Brad Moore, a …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … about several different pieces of her work, including bacterial quorum sensing and its effects on regulation of …
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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