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User Support Analysis Group
We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold vast potential for … water. These vents are too deep in the sea to get any sunlight, and yet they still support a unique array of … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Microbial species delineation using whole genome sequences
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility … the IGB fosters team science and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in Neurospora crassa
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … associated with leaf angle, which determines how much sunlight leaves can get and in turn serves as a predictor of …
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The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for … Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  …
Learn more

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