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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … times, including a number of projects that point to the potential of seed oils as biofuel. After analyzing the original sequence, Gary Stacey … Glycine max on Phytozome …
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Early Diverging Fungus Mucor circinelloides Lacks Centromeric Histone CENP-A and Displays a Mosaic of Point and Regional Centromeres
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Acute Limonene Toxicity in Escherichia coli Is Caused by Limonene Hydroperoxide and Alleviated by a Point Mutation in Alkyl Hydroperoxidase AhpC
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …
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JGI Accepts 17 Proposals for Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … harnessing genomics to developing sustainable resources for biofuels and bioproducts. Andrew Nelson of the Boyce … latitude wetlands, such as the Copper River Delta wetland pond, cycle carbon. Using plots at the Harvard Forest …
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … but at the same time, there’s a lot of interesting starting points for medicinal chemists to play with. And we tried to …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … fundamentally what’s going on in the cell as it responds to its ocean environment. And as we understand that we … from University of California (UC), San Diego and Scripps Institution of Oceanography (SIO). You can find the podcast …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … whose biomass can be renewably converted into energy or biofuels. Although a member of the grass family, as its name … the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will help …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … habitat restoration and as a feedstock for biomass-based biofuel production. As seen with many commonly cultivated … about how C4 perennial grasses like switchgrass respond to pronounced climate shifts. (C4 plants use a more …
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Publication Policy
… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the research is published. The JGI expects that the … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …
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