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Natural Prodcast Episode 4: Nancy Keller
… [Takemura] and I chatted about science. This episode is our conversation with Nancy Keller, a fantastic fungal … in that area?   NANCY: Oh, well, I love fungi, okay, this doesn’t even have anything to use natural products … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …
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Synthesis
… Check out our organism-agnostic CRISPR gRNA design tool  … More Resources …
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Partnerships: Myco-Ed
… Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that … compile original data for improving fungal genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, …
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JGI@25: Studying Sorghum’s Survival Skills
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use whole-genome shotgun sequencing to analyze the 730-megabase Sorghum bicolor (L.) …
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Natural Prodcast Episode 20: Brian Bachmann
… to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian Bachmann … at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and I’ll … we also worked in DIANs. We worked on that. We had separate projects with John Thorson and Ben Shen. [Listen here to Ben …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first episode up … genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, science … in partnering with us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, …
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JGI@25: Using Team Science to Build Communities Around Data
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are … function across the phylogeny — and link these into our DOE crop plants, so we can learn from evolution that has …
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Microbiome Data Science Team
… other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative analysis of thousands of archaeal …
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Chapter Five The Sphagnum Genome Project A New Model for Ecological and Evolutionary Genomics
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The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata
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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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