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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … to trees; plant pathogens colonize living plants to feed on them.  Across the forest types, Martin and his team … genomes at the JGI,” Martin said. An effort called the 1000 Fungal Genomes project changed that. This is a …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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Fungal & Algal Program
… Genomic Encyclopedia of Fungi focuses on aspects of plant feedstock health, biorefinery mechanisms and fungal … maintenance is critical for sustainable growth of biofuel feedstock and fungi, as symbionts, pathogens, and biocontrol agents dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to …
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New and Improved: Eucalyptus Reference is Now Accessible
… sequences of individual chromosomes. The team describes the latest eucalyptus reference genome, this time generated …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. … over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces … v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome v13. Below …
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JGI-TMF Critical Minerals and Materials Call
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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FICUS Overview
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Improving the Cacao Genome and Phytozome
… That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is … 1-6 genome is now available for comparative purposes on the latest version of the JGI plant portal Phytozome at  …
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