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JGI@25: Using Team Science to Build Communities Around Data
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these …
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Secondary Metabolites Program
… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … biochemical diversity within secondary metabolites, expanding their potential applications in the bioeconomy …
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Data Ecosystem
To expand access to integrated data, improve tools and … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …
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Triggering Morel Fruiting
DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired from … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest … carbon from lignocellulosic-abundant matters such as plant litter and to incorporate the assimilated carbon into …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth Center) drove up and down the … photosynthesis, a concern as extreme weather events become more frequent. “A big part of the Danforth Center’s mission …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US … we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I … conditions could help us to one day develop plants that are more drought-tolerant. These kinds of innovations are …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on … submitted to the JGI at any time using a simple web-based form and are reviewed annually. For accepted proposals, …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI … beyond cataloging the genes of microorganisms and start making quantitative measurements that answer questions such …
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Reference genome sequence of the model plant Setaria
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Ancient Algae Reveal Secrets of Plant Evolution
… existed in close algal relatives  to terrestrial plants showcases how early plants built upon an ancient genetic … the evolutionary lineage leading to land plants is more complex than previously thought.  The researchers found … that  Zygnematophyceae share key genes with land plants for making and modifying cell walls, a feature crucial for …
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Jeremy Schmutz
Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … the Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , … to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. polymorpha has been used as a … could help researchers better understand related genes in more complex plants that could be applied toward …
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