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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Natural Prodcast Episode 17: Cassandra Quave
… herbarium curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … a very long process. And then finally, if all of that still works, and you have a good target and a good drug, and …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … natural products – I did my Ph.D. with Craig Townsend and worked on aflatoxin biosynthesis, aflatoxin being a … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – …
Learn more
Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … Prize in Chemistry to seven. Doudna was recognized for her work on CRISPR-Cas9, technology described by the Nobel … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy … This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Natural Prodcast Episode 19: Bill Fenical
… to succeed, and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary … things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Genome sequence of the palaeopolyploid soybean
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last … addition to the public/private status. Q: Does Data Portal work well with KBase and NMDC? A: We have reached out to … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. …
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