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Rex Malmstrom
… and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he developed a high throughput approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing …
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2024 Progress Report
… in the latest advanced genomic capabilities to remain innovative and cutting-edge.   … A record number of primary … This year we brought online the latest short-read technology, the Illumina NovaSeq X Plus, and the latest … genomic innovation to provide the foundational biological understanding that opens up new ways to harness biology. …
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Building on basic metagenomics with complementary technologies
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Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata
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Development of Ratiometric Bioluminescent Sensors for in Vivo Detection of Bacterial Signaling
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Environmental Genomics Group
… capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem … al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A … al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. …
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Frequently Asked Questions: Project Management
… ) Metagenomes and Single Cells: IMG/M   (citation: … of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) … In …
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scMicrobe PTA: near complete genomes from single bacterial cells
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Cell by cell: population genetics in the wild
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees … to conduct a wide variety of analyses that can enhance our understanding of plant-microbe interactions — with potential …
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Taking Stock of the Known and Unknown Microbial Space
… still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their … global nutrient cycles. The information gained from understanding the interactions between microbes, hosts, and … data are publicly available in the National Center for Biotechnology Information (NCBI) GenBank collection and on the …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors … one type of RNA polymerase responsible for each gene. These bacterial RNA polymerases are made up of a core enzyme … factors and even other organisms can fuel a deeper understanding of these transcriptional regulatory networks. …
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