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An Integrated Dataset to Understand Ecosystem Interaction
… poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how healthy … data set will help identify how different elements of the ecosystem interact and respond to changes in the … water-quality regulation. Focusing on the rhizosphere and interactions between the trees, microbes and soil chemistry …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE Metrics There … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … assembly from virus pools/plaques obtained from a single host, many unordered contigs. Assembly, annotation ( IMG ) …
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Pathway and Gene Discovery from Natural Hosts and Organisms
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following … are expected to be familiar with this policy. Our aim in hosting an event is to build a stronger community. Our goal … every participant. We invite all those who participate to help us create safe and positive experiences for everyone. …
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JGI Hosts GPU Hackathon in May
Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … we will have available.” A maximum of six teams will be hosted at the Hackathon, with 1-2 mentors per team. … and the code owners will be able to get assistance from mentors and a team to port their code to a new …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … annual JGI User Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … (5), 255-255 Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 …
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DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial …
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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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Genome‐based evolutionary history of Pseudomonas spp
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