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Database provides details on river microbes in 90% of US continental watersheds. The … are also available through the DOE Systems Biology Knowledgebase, allowing researchers to immediately explore and … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … the fungal Tree of Life, including the 1000 Fungal Genomes Project, which aims to provide a reference genome for each …

With a background in experimental and computational surface physics, Dr. Goodstein held positions at … in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type …

For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, … at a high level as JGI transitioned from the Human Genome Project to gaining momentum as a national user facility. He … that in retirement, Ray won’t be logging the miles on a daily commute (over 100 roundtrip every day, conservatively …

See below for a list of Frequently Asked Questions about our proposal submission process. You can review … ; click on the call link to see specific details including project types supported, sample/capacity limits, and … should indicate this in the proposal so we can select the project provisionally. If your project makes it successfully …

Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start … challenges UC Merced graduate students with individual projects at the DOE JGI that provide hands-on experience in … it’s getting closer to producing trillion base data sets on daily basis.” As part of their learning experience, the …

The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

Uncovering associations between plant roots and fungi that can help or harm … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture … is an “excellent example” of how a 1000 Fungal Genomes project can enable studies of plant root microbiome and …

… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to … stewardship values which are integral to what I do on a daily basis. Two of the most relevant are service and …

Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …

… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me … one that incorporates big data. A large part of my project this summer was utilizing a high performance cluster …