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Fungal Friends or Foes in Plant Roots
… fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Their findings …
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A Plant Root Atlas for Tracking Developmental Trajectories
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … a foundational data set that is now available through a new  single-cell data viewer that was collaboratively …
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A Natural Mechanism Can Turbocharge Viral Evolution
… how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … a DOE Office of Science user facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), has looked for … and viral genomes, as well as genomes sampled all at once from the same environment, called metagenomes. Why? Simon …
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Data Ecosystem
To expand access to integrated data, improve tools and … for microbiome data science, and the development of new informatics tools specifically optimized for … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and the  DOE …
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Tracking the Origins of Methane-Producing Microbes
Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over … user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) describe a … data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the world, …
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Novel Hydrophobins from Trichoderma Define a New Hydrophobin Subclass: Protein Properties, Evolution, Regulation and Processing
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Microbial Ecology on Solar Panels in Berkeley, CA, United States
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian … who have not led any previously accepted proposals.  The New Investigator call , part of our  Community Science …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) … Viral EcoGenomics & …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … challenges.   Scanning the California oak woodlands from the air, large swaths of the bleached, skeletal remains … crisis, Matteo Garbelotto joined the faculty at UC Berkeley to lead the Forest Pathology and Mycology …
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