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Natural Prodcast Episode 24: Jackie Winter and SMC
… reminds me almost working with Bill back in the ’50s and ’60s of the golden age of antibiotic discoveries. Everything … WINTER: It doesn’t end well for anyone. I’ve had to walk home a couple of times last time when we’ve had those … of like we do with GNPS, the Global Natural Product Social Molecular Network, where you can teach people in real time …
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JGI Early Career Researchers Featured in mSystems Special Issue
… first time. A second approach known as DNA stable isotope probing (DNA SIP) relies on incubating DNA with … compounds to link active microbes with specific metabolic processes. A third approach steps away from reconstructing … can develop high-throughput and high-resolution studies of interactions between host cells and viruses in the …
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Digging into Microbial Ecosystems Deep Underground
… so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty … Facilities Integrating Collaborations for User Science (FICUS) . Through FICUS, the researchers have tapped into the … and capabilities of both the JGI and the Environmental Molecular Science Laboratory (EMSL) at Pacific Northwest …
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Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling
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Viral elements and their potential influence on microbial processes along the permanently stratified Cariaco Basin redoxcline
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Toward More Efficient Artificial Photosynthesis
… remove carbon from the atmosphere than current natural processes and use it as a sustainable resource for making … International Max-Planck Research School for Environmental, Cellular and Molecular Microbiology, Marburg, Germany. …
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Partnerships: Myco-Ed
Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … partnered with the Arizona Genomics Institute where high molecular weight DNA is extracted from samples, which is …
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A Natural Mechanism Can Turbocharge Viral Evolution
… open the doors to characterizing how DGRs work at the molecular level. Scientists might then harness them as molecular tools for research and industry applications. … Office of Biological and Environmental Research (DE-SC0004632, DE-SC0010580, DE-SC0016440), and acknowledge the …
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Environmental Genomics Group
… quantitative analysis strategy for stable isotope probing metagenomics . mSystems , … A. et al. (2021)  DOE JGI metagenome workflow . mSystems 6(3). 10.1128/MSYSTEMS.00804-20 Nayfach S et al.  A Genomic … Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. (2019)  Spatial, Temporal, and …
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You Can Move, But You Can’t Hide
… into Earth’s ecosystems, researchers must examine the interactions that happen between tiny organisms (microbes) … and water. MGEs like viruses and plasmids drive microbial processes and evolution. This is because MGEs can affect a … more about the genomics of MGEs and their evolution at the cellular level, scientists can better understand …
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Refining the Process of Identifying Algae Biotechnology Candidates
… that simulated summer in Arizona. Scenedesmus  sp. NREL 46B-D3, which thrives both in saltwater and wastewater, was … and analyzed its metabolome to understand the metabolic processes involved in responding to various stresses, and … Energy (EERE) under Agreements NL0032355 and NL0032266. This work was also completed in part by the National …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … to study individually. Many microorganisms hold clues to processes like biodegradation, with potential applications …
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