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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … on a pilot project with biology students from Boca Raton Community High School in Palm Beach County, Florida. The … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … in metabolic engineering and biocatalyst design will target sustainable energy solutions, focusing on …
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Natural Prodcast Episode 19: Bill Fenical
… Ecology that has a marine component. And really the community out there now understands this fact very well. So … survival. Those molecules, over evolutionary time, become targeted to certain biological systems in the target … powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no …
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Single Cell Research Group
… of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … Woyke T ., Doud D. F. R., Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods 14(11): …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — but not …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Natural Prodcast Episode 22: Alison Narayan
… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … mean, we found sometimes enzymes that are the most similar within our libraries can have drastically different … that. Even having that kind of data and sharing it with the community though can help inform how synthetic chemists …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… ID’ing RNA viruses with ease : Searching for RNA sequences within a database can be like combing for the proverbial need in a haystack — until now. Scientists have recently created a computational pipeline that scans specifically for RNA virus sequences, … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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High-resolution metagenomics targets specific functional types in complex microbial communities
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Examples: Successful LOIs & Submissions
… below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as … Microbial contributions to soil carbon storage during …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale … the millet to thrive in drought conditions. The proposal targets the CSP focus area in plant microbiomes, as well as …
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