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Frequently Asked Questions: Project Management
… Agreement and Appendix are active and if no additional signatures are required. Learn more about User Agreements and … No. However, the JGI does maintain a list of protocols, found in our HERE (TK) , used … listed on the “info” page for that organism on the Genome Portal . …
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Improved chromosome-level genome assembly and annotation of the seagrass, Zostera marina (eelgrass)
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JGI-TMF Critical Minerals and Materials Call
… to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research … placed in rank order by the reviewers. The ranked proposal list, along with a recommendation from management at the JGI …
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A parts list for fungal cellulosomes revealed by comparative genomics
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Ocean current patterns drive the worldwide colonization of eelgrass (Zostera marina)
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The Surprising Structure of a Shrub Willow Sex Chromosome
… Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … complete sex chromosomes. The results were published in  Genome Biology . The team found that the shrub willow’s W … of the sequences. The variety of palindromes observed in nature — for example, in humans Y chromosomes and some …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … publications that Grimwood contributed to include: A 2021 Nature paper announcing a high-quality reference sequence of the …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic … Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … industry applications. Summary In their recently published Nature Communications article , the team used publicly …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an estimated $4 … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) …
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Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.
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How to Submit Sequencing Samples
… samples to the JGI. PI sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … for shipping your materials to the JGI. The Shipping Checklist below will assist you in verifying that all required …
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