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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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RNA-Seq Reveals that Light and Darkness Are Different Stimuli in Freshwater Heterotrophic Actinobacteria
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample … offered 7 seminars to the class throughout the project life cycle. During regular web conferences, various JGI subject … to assist them with soil sample analysis for nitrogen and carbon concentrations along with water content. The class …
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Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
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Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. Later during his postdoctoral work at the …
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Life strategies for Aminicenantia in subseafloor oceanic crust
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have … Lab led to the identification of key microbial culprits in carbon fixation in the dark ocean. Combining single cell genomics and synthetic …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The … can thus have significant impacts on the global nutrient cycles regulated by their hosts. For example, microbes that capture and store carbon in the ocean could fix less carbon when infected. …
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Draft Genome Sequence of Microdochium bolleyi, a Dark Septate Fungal Endophyte of Beach Grass
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Acquisition of host-derived carbon in biomass of ectomycorrhizal fungus pisolithus microcarpus is correlated to fungal carbon demand and plant defences.
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