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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I … what might happen for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the use of … a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop … Project design with Principal Investigator Providing a general orientation to JGI systems to Investigators …
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Natural Prodcast Episode 8: Eric Schmidt
… metabolite peptides. And there are two ways that nature does this. The more well-known secondary metabolism systems … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been … help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass … that would be produced by microorganisms — out,” said JGI user/collaborator Michelle O’Malley, a chemical and …
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Natural Prodcast Episode 7: Ben Shen
… think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … What is beautiful for natural products is nature! Nature does this sort of – if you think of nature as a scientist, … product chemistry? BEN:  Yeah. So, I was trained as a plant natural product chemist. When I first started in …
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CSP Functional Genomics
… function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at …
Learn more
JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … ra-MOR-um) the genus in Latin translates to “plant destroyer” and it has served as just that on a … pathogen and trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … into sustainable biofuels . For its importance to the DOE mission, switchgrass is among the JGI Flagship Plants . Since 2007, the JGI has been working on identifying … Plant Dataset …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … work, enabled in part by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place … 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will …
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JGI-TMF Critical Minerals and Materials Call
… free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All JGI data is made publicly available in accordance with the JGI’s Data Policy . In cases where the JGI provides … the other participating facilities, is then forwarded to DOE for final approval. Following DOE approval, project …
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … have any questions, please contact your Project Manager or jgi[email protected] . … & quality requirements for samples submitted to the DOE JGI. DNA Preparation Guidelines RNA Preparation …
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