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Partners
… and develops others providing complementary expertise to advance the science and serve as impact multipliers . The … RNA extractions to support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy …
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Simon Roux
… interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established and currently … et al., 2023. iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses … DOE BER Early Career Research Program, 2021 Thomson Reuters …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch event promoting … collaborations through the U.S. Department of Energy (DOE)’s Visiting Faculty Program (VFP) . The VFP is a summer …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has … download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is currently only … faster API downloads “Currently, our team is wrapping up work on the Phytozome download experience and beginning work …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough … dioxide, methane, and nitrous oxide). Summary To do this work, the international scientific team led by Petr Baldrian … The team worked with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … and drive to give his students this experience. My current career path was heavily influenced by my own high school … final paper that  could be published. Watching 18 students working to create a paper simultaneously in the same …
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Alabama Agricultural & Mechanical University Internship Program
… their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific … them to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and gain …
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The JGI announces 2024 awardees for our Community Science Program annual call
… From left to right: [above] Olivia Ahern, Adriana Corales, Hugh Cross, … Hannah Schulman, Bram Stone and Jana Voriskovaa The JGI is excited to announce the fifteen scientists selected … various important scientific questions relevant to the DOE’s mission, and I look forward to seeing their outcomes.” …
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening … year we look for novel research projects — aligned with DOE missions and from PIs who have not led any … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … that showcase our collaborations and capabilities to enable great science that will help solve energy and … researchers isolated and sequenced DNA from rumen microbes involved in the digestion process.  “We wanted to find the …
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input … and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community, and promotes communication and collaboration within the user community. …
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