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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … foundational knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. … water-quality regulation. Focusing on the rhizosphere and interactions between the trees, microbes and soil chemistry …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … through its  User Programs on a competitive, peer-reviewed basis. Speakers and attendees from many corners of the globe … has been at the forefront of Covid-19 research (see his  2021 VEGA talk ). A global authority on viruses, Holmes was …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid … Vardi, who delved into algae blooms and the alga-viral interactions within them; and Susan Wessler of UC Riverside, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the sponges talk to each other? ERIC:   He was looking at interactions between sponges and other organisms. So one of … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let us know! …
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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Population genomics provides insights into the genetic basis of adaptive evolution in the mushroom-forming fungus Lentinula edodes
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … with Marnix on putting that stuff together. It’s been kind of a theme, I think, in the last couple of conversations … how to work with these really complex and incredible microorganisms. And it was decades-worth of top level …
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Building Sphagnum Genomic Resources
… The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and …
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JGI User Executive Committee Expands
… have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute … he’s interested in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback … CSP New Investigator proposal to understand the genetic basis of fungal community assembly on dead wood …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that … synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions …
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Cultivating Symbiotic Antarctic Microbes
… The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment environments, water and … cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe …
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