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Finding the Fermenters
… an interactive browser that allows other researchers to study the genomes and predict the metabolic abilities of … One test was to predict traits of more than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …
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Red seaweed supplementation suppresses methanogenesis in the rumen, revealing potentially advantageous traits among hydrogenotrophic bacteria
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … in 2004. The main object of her research was the symbiont community of a gutless oligochaete for which she deciphered … The Deputy of User Programs provides direction, leadership and oversight for all of the JGI user …
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Partnerships: Adopt-A-Genome
… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … culture. Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. … over 125,000 partial and complete viral genomes. That study multiplied the number of known viral genes by a factor …
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Bacterial barcoding facilitates plant microbiome studies.
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together … and applying laboratory ecosystems to help transition microbiome science from largely observational to … EcoFAB 2025 Conference is organized by the EcoFAB Steering Committee, dedicated to advancing standardized fabricated …
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Metagenomics
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Community Science Program
… The Community Science Program (CSP) provides the scientific … projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance … is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …
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A Molecular Study of Microbe Transfer between Distant Environments
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Genome sequencing of Porostereum spadiceum to study the degradation of levofloxacin
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